STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL64049.1Ca-activated chloride channel family protein. (662 aa)    
Predicted Functional Partners:
SHL78432.1
Protoporphyrin IX magnesium-chelatase.
  
 0.946
SHL64002.1
Hypothetical protein.
 
    
0.907
SHL64089.1
Hypothetical protein.
       0.702
SHN01314.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
   
 
  0.600
SHN34149.1
Ferredoxin-NADP reductase.
   
 
  0.600
SHL78307.1
Cobaltochelatase CobN.
  
 0.568
SHL78351.1
Cobaltochelatase CobN subunit.
  
 0.568
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
 0.428
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.