Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK58036.1 | SHL67902.1 | SAMN05216499_10191 | SAMN05216499_105272 | L-aspartate aminotransferase apoenzyme. | Prephenate dehydratase. | 0.941 |
SHK58036.1 | SHL78790.1 | SAMN05216499_10191 | SAMN05216499_10673 | L-aspartate aminotransferase apoenzyme. | Histidinol-phosphate aminotransferase. | 0.914 |
SHK58036.1 | SHM08132.1 | SAMN05216499_10191 | SAMN05216499_10870 | L-aspartate aminotransferase apoenzyme. | Prephenate dehydratase. | 0.980 |
SHK58036.1 | SHM55849.1 | SAMN05216499_10191 | SAMN05216499_11230 | L-aspartate aminotransferase apoenzyme. | Aspartate/methionine/tyrosine aminotransferase. | 0.927 |
SHK58036.1 | SHN11361.1 | SAMN05216499_10191 | SAMN05216499_12132 | L-aspartate aminotransferase apoenzyme. | Prephenate dehydrogenase. | 0.930 |
SHK58036.1 | hisC | SAMN05216499_10191 | SAMN05216499_106186 | L-aspartate aminotransferase apoenzyme. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.914 |
SHK58036.1 | pat | SAMN05216499_10191 | SAMN05216499_105241 | L-aspartate aminotransferase apoenzyme. | Histidinol-phosphate aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. | 0.925 |
SHL67902.1 | SHK58036.1 | SAMN05216499_105272 | SAMN05216499_10191 | Prephenate dehydratase. | L-aspartate aminotransferase apoenzyme. | 0.941 |
SHL67902.1 | SHL67978.1 | SAMN05216499_105272 | SAMN05216499_105274 | Prephenate dehydratase. | Copper transport protein. | 0.867 |
SHL67902.1 | SHL78790.1 | SAMN05216499_105272 | SAMN05216499_10673 | Prephenate dehydratase. | Histidinol-phosphate aminotransferase. | 0.925 |
SHL67902.1 | SHM08132.1 | SAMN05216499_105272 | SAMN05216499_10870 | Prephenate dehydratase. | Prephenate dehydratase. | 0.925 |
SHL67902.1 | SHM55367.1 | SAMN05216499_105272 | SAMN05216499_11218 | Prephenate dehydratase. | Chorismate mutase. | 0.935 |
SHL67902.1 | SHM55849.1 | SAMN05216499_105272 | SAMN05216499_11230 | Prephenate dehydratase. | Aspartate/methionine/tyrosine aminotransferase. | 0.914 |
SHL67902.1 | SHN11361.1 | SAMN05216499_105272 | SAMN05216499_12132 | Prephenate dehydratase. | Prephenate dehydrogenase. | 0.972 |
SHL67902.1 | aroC | SAMN05216499_105272 | SAMN05216499_14011 | Prephenate dehydratase. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.867 |
SHL67902.1 | hisC | SAMN05216499_105272 | SAMN05216499_106186 | Prephenate dehydratase. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.925 |
SHL67902.1 | pat | SAMN05216499_105272 | SAMN05216499_105241 | Prephenate dehydratase. | Histidinol-phosphate aminotransferase; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. | 0.925 |
SHL67978.1 | SHL67902.1 | SAMN05216499_105274 | SAMN05216499_105272 | Copper transport protein. | Prephenate dehydratase. | 0.867 |
SHL67978.1 | SHM08132.1 | SAMN05216499_105274 | SAMN05216499_10870 | Copper transport protein. | Prephenate dehydratase. | 0.471 |
SHL78790.1 | SHK58036.1 | SAMN05216499_10673 | SAMN05216499_10191 | Histidinol-phosphate aminotransferase. | L-aspartate aminotransferase apoenzyme. | 0.914 |
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