STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL68861.1RNA polymerase sigma-70 factor, sigma-E family; Belongs to the sigma-70 factor family. ECF subfamily. (174 aa)    
Predicted Functional Partners:
SHN22067.1
Hypothetical protein.
   
   0.783
SHL68890.1
fatty-acyl-CoA synthase.
       0.781
SHL68829.1
Protein of unknown function.
       0.778
SHK72613.1
RNA polymerase, sigma 29 subunit, SigE; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.742
SHL25577.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.738
SHL65102.1
RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.731
SHK65347.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
   
 0.707
SHL68792.1
Hypothetical protein.
       0.705
SHL10795.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.704
SHN15402.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.697
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.