Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK54753.1 | SHL69099.1 | SAMN05216499_1012 | SAMN05216499_105308 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | DNA binding domain-containing protein, excisionase family. | 0.660 |
SHK54753.1 | SHL69136.1 | SAMN05216499_1012 | SAMN05216499_105309 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Hypothetical protein. | 0.525 |
SHK54753.1 | SHL82262.1 | SAMN05216499_1012 | SAMN05216499_106163 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | Glutamate synthase (NADH) large subunit. | 0.977 |
SHK54753.1 | SHM13096.1 | SAMN05216499_1012 | SAMN05216499_108197 | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.999 |
SHL69066.1 | SHL69099.1 | SAMN05216499_105307 | SAMN05216499_105308 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | DNA binding domain-containing protein, excisionase family. | 0.812 |
SHL69066.1 | SHL69136.1 | SAMN05216499_105307 | SAMN05216499_105309 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.850 |
SHL69066.1 | SHL69174.1 | SAMN05216499_105307 | SAMN05216499_105310 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.470 |
SHL69066.1 | SHL69205.1 | SAMN05216499_105307 | SAMN05216499_105311 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.522 |
SHL69066.1 | SHL69252.1 | SAMN05216499_105307 | SAMN05216499_105312 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Mobile element transfer protein. | 0.514 |
SHL69066.1 | SHL69290.1 | SAMN05216499_105307 | SAMN05216499_105313 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Protein of unknown function. | 0.499 |
SHL69099.1 | SHK54753.1 | SAMN05216499_105308 | SAMN05216499_1012 | DNA binding domain-containing protein, excisionase family. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.660 |
SHL69099.1 | SHL69066.1 | SAMN05216499_105308 | SAMN05216499_105307 | DNA binding domain-containing protein, excisionase family. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.812 |
SHL69099.1 | SHL69136.1 | SAMN05216499_105308 | SAMN05216499_105309 | DNA binding domain-containing protein, excisionase family. | Hypothetical protein. | 0.812 |
SHL69099.1 | SHL69174.1 | SAMN05216499_105308 | SAMN05216499_105310 | DNA binding domain-containing protein, excisionase family. | Hypothetical protein. | 0.470 |
SHL69099.1 | SHL69205.1 | SAMN05216499_105308 | SAMN05216499_105311 | DNA binding domain-containing protein, excisionase family. | Hypothetical protein. | 0.529 |
SHL69099.1 | SHL69252.1 | SAMN05216499_105308 | SAMN05216499_105312 | DNA binding domain-containing protein, excisionase family. | Mobile element transfer protein. | 0.493 |
SHL69099.1 | SHL69290.1 | SAMN05216499_105308 | SAMN05216499_105313 | DNA binding domain-containing protein, excisionase family. | Protein of unknown function. | 0.453 |
SHL69099.1 | SHL82262.1 | SAMN05216499_105308 | SAMN05216499_106163 | DNA binding domain-containing protein, excisionase family. | Glutamate synthase (NADH) large subunit. | 0.826 |
SHL69099.1 | SHM13096.1 | SAMN05216499_105308 | SAMN05216499_108197 | DNA binding domain-containing protein, excisionase family. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.660 |
SHL69136.1 | SHK54753.1 | SAMN05216499_105309 | SAMN05216499_1012 | Hypothetical protein. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.525 |
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