Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL70086.1 | SHL70145.1 | SAMN05216499_105334 | SAMN05216499_105335 | Trans-2,3-dihydro-3-hydroxyanthranilate isomerase. | Protein N-acetyltransferase, RimJ/RimL family. | 0.553 |
SHL70086.1 | SHL70178.1 | SAMN05216499_105334 | SAMN05216499_105336 | Trans-2,3-dihydro-3-hydroxyanthranilate isomerase. | Kanamycin kinase. | 0.423 |
SHL70145.1 | SHL70086.1 | SAMN05216499_105335 | SAMN05216499_105334 | Protein N-acetyltransferase, RimJ/RimL family. | Trans-2,3-dihydro-3-hydroxyanthranilate isomerase. | 0.553 |
SHL70145.1 | SHL70178.1 | SAMN05216499_105335 | SAMN05216499_105336 | Protein N-acetyltransferase, RimJ/RimL family. | Kanamycin kinase. | 0.576 |
SHL70178.1 | SHL70086.1 | SAMN05216499_105336 | SAMN05216499_105334 | Kanamycin kinase. | Trans-2,3-dihydro-3-hydroxyanthranilate isomerase. | 0.423 |
SHL70178.1 | SHL70145.1 | SAMN05216499_105336 | SAMN05216499_105335 | Kanamycin kinase. | Protein N-acetyltransferase, RimJ/RimL family. | 0.576 |
SHL70178.1 | SHM78754.1 | SAMN05216499_105336 | SAMN05216499_11488 | Kanamycin kinase. | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | 0.519 |
SHL70178.1 | SHN04036.1 | SAMN05216499_105336 | SAMN05216499_1197 | Kanamycin kinase. | Methyltransferase domain-containing protein. | 0.402 |
SHM78754.1 | SHL70178.1 | SAMN05216499_11488 | SAMN05216499_105336 | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | Kanamycin kinase. | 0.519 |
SHM78754.1 | SHN04036.1 | SAMN05216499_11488 | SAMN05216499_1197 | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | Methyltransferase domain-containing protein. | 0.506 |
SHN04036.1 | SHL70178.1 | SAMN05216499_1197 | SAMN05216499_105336 | Methyltransferase domain-containing protein. | Kanamycin kinase. | 0.402 |
SHN04036.1 | SHM78754.1 | SAMN05216499_1197 | SAMN05216499_11488 | Methyltransferase domain-containing protein. | Predicted kinase, aminoglycoside phosphotransferase (APT) family. | 0.506 |