STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL70377.1GtrA-like protein. (435 aa)    
Predicted Functional Partners:
SHL70414.1
4-amino-4-deoxy-L-arabinose transferase.
 
  
 0.972
SHM72040.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 
 0.855
SHL70332.1
Two-component system, OmpR family, sensor kinase.
 
     0.819
SHL70293.1
Two-component system, OmpR family, response regulator.
 
     0.774
SHN00453.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
    
  0.589
SHL57242.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
  
 
 0.587
SHN10987.1
Hypothetical protein.
  
   0.565
SHN35039.1
Putative flippase GtrA (transmembrane translocase of bactoprenol-linked glucose).
  
 
 0.557
SHN25216.1
Signal transduction histidine kinase.
  
  
 0.554
SHM46911.1
Endoglucanase.
    
 0.551
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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