Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL32264.1 | SHL70451.1 | SAMN05216499_103392 | SAMN05216499_105343 | Hypothetical protein. | PPOX class probable F420-dependent enzyme. | 0.603 |
SHL32264.1 | SHM33275.1 | SAMN05216499_103392 | SAMN05216499_11081 | Hypothetical protein. | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | 0.603 |
SHL41666.1 | SHL70451.1 | SAMN05216499_10486 | SAMN05216499_105343 | Deazaflavin-dependent oxidoreductase, nitroreductase family. | PPOX class probable F420-dependent enzyme. | 0.496 |
SHL41666.1 | SHM44155.1 | SAMN05216499_10486 | SAMN05216499_11133 | Deazaflavin-dependent oxidoreductase, nitroreductase family. | Probable F420-dependent oxidoreductase, Rv3520c family. | 0.768 |
SHL41666.1 | SHM79075.1 | SAMN05216499_10486 | SAMN05216499_11496 | Deazaflavin-dependent oxidoreductase, nitroreductase family. | Probable F420-dependent oxidoreductase, Rv1855c family. | 0.700 |
SHL45761.1 | SHL70451.1 | SAMN05216499_104183 | SAMN05216499_105343 | Deazaflavin-dependent oxidoreductase, nitroreductase family. | PPOX class probable F420-dependent enzyme. | 0.494 |
SHL45761.1 | SHM44155.1 | SAMN05216499_104183 | SAMN05216499_11133 | Deazaflavin-dependent oxidoreductase, nitroreductase family. | Probable F420-dependent oxidoreductase, Rv3520c family. | 0.783 |
SHL45761.1 | SHM79075.1 | SAMN05216499_104183 | SAMN05216499_11496 | Deazaflavin-dependent oxidoreductase, nitroreductase family. | Probable F420-dependent oxidoreductase, Rv1855c family. | 0.742 |
SHL70451.1 | SHL32264.1 | SAMN05216499_105343 | SAMN05216499_103392 | PPOX class probable F420-dependent enzyme. | Hypothetical protein. | 0.603 |
SHL70451.1 | SHL41666.1 | SAMN05216499_105343 | SAMN05216499_10486 | PPOX class probable F420-dependent enzyme. | Deazaflavin-dependent oxidoreductase, nitroreductase family. | 0.496 |
SHL70451.1 | SHL45761.1 | SAMN05216499_105343 | SAMN05216499_104183 | PPOX class probable F420-dependent enzyme. | Deazaflavin-dependent oxidoreductase, nitroreductase family. | 0.494 |
SHL70451.1 | SHL82193.1 | SAMN05216499_105343 | SAMN05216499_106161 | PPOX class probable F420-dependent enzyme. | Hypothetical protein. | 0.603 |
SHL70451.1 | SHL87563.1 | SAMN05216499_105343 | SAMN05216499_106314 | PPOX class probable F420-dependent enzyme. | Hypothetical protein. | 0.499 |
SHL70451.1 | SHM33275.1 | SAMN05216499_105343 | SAMN05216499_11081 | PPOX class probable F420-dependent enzyme. | Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family. | 0.638 |
SHL70451.1 | SHM44155.1 | SAMN05216499_105343 | SAMN05216499_11133 | PPOX class probable F420-dependent enzyme. | Probable F420-dependent oxidoreductase, Rv3520c family. | 0.483 |
SHL70451.1 | SHM79075.1 | SAMN05216499_105343 | SAMN05216499_11496 | PPOX class probable F420-dependent enzyme. | Probable F420-dependent oxidoreductase, Rv1855c family. | 0.580 |
SHL70451.1 | SHN34894.1 | SAMN05216499_105343 | SAMN05216499_1425 | PPOX class probable F420-dependent enzyme. | CsbD-like; Belongs to the UPF0337 (CsbD) family. | 0.525 |
SHL70451.1 | arcA | SAMN05216499_105343 | SAMN05216499_11492 | PPOX class probable F420-dependent enzyme. | Arginine deiminase. | 0.465 |
SHL82193.1 | SHL70451.1 | SAMN05216499_106161 | SAMN05216499_105343 | Hypothetical protein. | PPOX class probable F420-dependent enzyme. | 0.603 |
SHL87563.1 | SHL70451.1 | SAMN05216499_106314 | SAMN05216499_105343 | Hypothetical protein. | PPOX class probable F420-dependent enzyme. | 0.499 |
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