STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL70451.1PPOX class probable F420-dependent enzyme. (153 aa)    
Predicted Functional Partners:
SHM33275.1
Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family.
  
    0.638
SHL32264.1
Hypothetical protein.
       0.603
SHL82193.1
Hypothetical protein.
       0.603
SHM79075.1
Probable F420-dependent oxidoreductase, Rv1855c family.
  
     0.580
SHN34894.1
CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
    0.525
SHL87563.1
Hypothetical protein.
   
    0.499
SHL41666.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
     0.496
SHL45761.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
     0.494
SHM44155.1
Probable F420-dependent oxidoreductase, Rv3520c family.
  
     0.483
arcA
Arginine deiminase.
   
    0.465
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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