STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL57442.1Hypothetical protein. (440 aa)    
Predicted Functional Partners:
SHL57511.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
       0.548
SHL57545.1
Hypothetical protein.
       0.548
SHL57477.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
       0.548
SHL98232.1
Xanthomonas XOO_2897-like deaminase.
  
     0.512
SHL07336.1
Hypothetical protein.
  
     0.488
SHM46911.1
Endoglucanase.
    
 0.465
SHK91904.1
Immune inhibitor A.
  
     0.429
SHM44016.1
Hypothetical protein.
  
     0.429
SHN13917.1
Hypothetical protein.
  
     0.415
SHM00681.1
Glycosyl transferase family 2.
  
 
  0.410
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.