STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL80115.1ABC-2 type transport system permease protein. (267 aa)    
Predicted Functional Partners:
SHL80076.1
ABC-2 type transport system ATP-binding protein.
 
    0.975
SHL80158.1
Cytochrome c oxidase assembly protein subunit 15.
 
     0.855
SHL79990.1
Iron-regulated ABC transporter membrane component SufB.
       0.803
SHL80030.1
Predicted transcriptional regulator, ArsR family.
       0.803
SHL79748.1
Metal-sulfur cluster biosynthetic enzyme.
       0.735
SHL79784.1
Nitrogen fixation protein NifU.
       0.735
SHL68688.1
ABC-2 type transport system ATP-binding protein.
 
    0.703
SHM46830.1
ABC-2 type transport system permease protein.
  
  
  0.687
SHL68657.1
ABC-2 type transport system permease protein.
  
  
  0.632
dapD
2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.
       0.603
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.