STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL76448.1Two component transcriptional regulator, LuxR family. (215 aa)    
Predicted Functional Partners:
SHN25216.1
Signal transduction histidine kinase.
   
 0.989
SHL76490.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
  0.987
SHL49044.1
Signal transduction histidine kinase.
  
  0.859
SHM20447.1
Signal transduction histidine kinase.
  
  0.857
SHN09549.1
PAS domain S-box-containing protein.
 
  0.856
SHL30320.1
Signal transduction histidine kinase.
  
  0.853
SHN08220.1
Histidine kinase.
 
 0.852
SHL98153.1
Signal transduction histidine kinase.
  
  0.845
SHN16235.1
Signal transduction histidine kinase.
 
  0.844
SHL02738.1
Histidine kinase.
  
  0.843
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.