STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL83330.1NYN domain-containing protein. (431 aa)    
Predicted Functional Partners:
SHL83276.1
ABC-2 type transport system ATP-binding protein.
       0.819
SHL83209.1
Hypothetical protein.
 
     0.783
SHL83240.1
ABC-2 type transport system permease protein.
       0.765
SHN31036.1
Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.751
SHL06742.1
Hypothetical protein.
 
     0.727
SHL93222.1
PAS domain S-box-containing protein.
 
     0.714
SHL06095.1
Protein of unknown function.
  
     0.710
trmB
tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.694
SHN32250.1
Hypothetical protein.
 
     0.691
SHK93799.1
M6 family metalloprotease domain-containing protein.
  
     0.678
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.