STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL86940.1Phage shock protein A (PspA) family protein. (259 aa)    
Predicted Functional Partners:
SHK62963.1
Phage shock protein C (PspC) family protein.
 
 
 0.997
SHK62910.1
Phage shock protein C (PspC) family protein.
  
 
 0.989
SHL86903.1
Hypothetical protein.
 
     0.967
SHN25216.1
Signal transduction histidine kinase.
   
 
 0.961
SHK69501.1
Protein of unknown function.
 
  
 0.873
SHL86868.1
Signal transduction histidine kinase.
  
    0.830
SHL45690.1
Hypothetical protein.
 
     0.796
SHL86973.1
Protein of unknown function.
       0.769
SHM07287.1
PAS/PAC sensor hybrid histidine kinase.
    
 
 0.748
SHL68989.1
PAS domain S-box-containing protein.
    
 
 0.720
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.