STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM00081.1DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. (224 aa)    
Predicted Functional Partners:
SHN25216.1
Signal transduction histidine kinase.
  
 0.994
SHM00113.1
Signal transduction histidine kinase.
 
   0.982
SHN20293.1
Signal transduction histidine kinase.
 
 0.908
SHK66186.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
  
 0.904
SHM07287.1
PAS/PAC sensor hybrid histidine kinase.
  
0.901
SHN14358.1
Two-component system, OmpR family, sensor histidine kinase SenX3.
 0.898
SHM47757.1
PAS fold.
 0.896
SHK64928.1
Two-component system, OmpR family, sensor kinase.
 
 0.882
SHL57511.1
Two-component system, OmpR family, sensor histidine kinase MtrB.
  
  0.882
SHL45270.1
Two-component system, OmpR family, sensor histidine kinase PrrB.
  
 0.879
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.