Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK67011.1 | SHL08939.1 | SAMN05216499_101325 | SAMN05216499_102514 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.923 |
SHK67011.1 | SHL68989.1 | SAMN05216499_101325 | SAMN05216499_105303 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.930 |
SHK67011.1 | SHL93222.1 | SAMN05216499_101325 | SAMN05216499_10732 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein. | 0.929 |
SHK67011.1 | SHM07026.1 | SAMN05216499_101325 | SAMN05216499_10845 | Diguanylate cyclase (GGDEF) domain-containing protein. | Signal transduction histidine kinase. | 0.941 |
SHK67011.1 | SHM07287.1 | SAMN05216499_101325 | SAMN05216499_10851 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS/PAC sensor hybrid histidine kinase. | 0.998 |
SHK67011.1 | SHM72040.1 | SAMN05216499_101325 | SAMN05216499_113170 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.991 |
SHK67011.1 | SHN08220.1 | SAMN05216499_101325 | SAMN05216499_12018 | Diguanylate cyclase (GGDEF) domain-containing protein. | Histidine kinase. | 0.816 |
SHK67011.1 | SHN16161.1 | SAMN05216499_101325 | SAMN05216499_12366 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.888 |
SHK67011.1 | SHN21990.1 | SAMN05216499_101325 | SAMN05216499_12688 | Diguanylate cyclase (GGDEF) domain-containing protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.923 |
SHK67011.1 | SHN25216.1 | SAMN05216499_101325 | SAMN05216499_1296 | Diguanylate cyclase (GGDEF) domain-containing protein. | Signal transduction histidine kinase. | 0.998 |
SHL08939.1 | SHK67011.1 | SAMN05216499_102514 | SAMN05216499_101325 | PAS domain S-box-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.923 |
SHL08939.1 | SHL68989.1 | SAMN05216499_102514 | SAMN05216499_105303 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.980 |
SHL08939.1 | SHL93222.1 | SAMN05216499_102514 | SAMN05216499_10732 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.977 |
SHL08939.1 | SHM07026.1 | SAMN05216499_102514 | SAMN05216499_10845 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.976 |
SHL08939.1 | SHM07287.1 | SAMN05216499_102514 | SAMN05216499_10851 | PAS domain S-box-containing protein. | PAS/PAC sensor hybrid histidine kinase. | 0.999 |
SHL08939.1 | SHM72040.1 | SAMN05216499_102514 | SAMN05216499_113170 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.995 |
SHL08939.1 | SHN08220.1 | SAMN05216499_102514 | SAMN05216499_12018 | PAS domain S-box-containing protein. | Histidine kinase. | 0.988 |
SHL08939.1 | SHN16161.1 | SAMN05216499_102514 | SAMN05216499_12366 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.960 |
SHL08939.1 | SHN21990.1 | SAMN05216499_102514 | SAMN05216499_12688 | PAS domain S-box-containing protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.980 |
SHL08939.1 | SHN25216.1 | SAMN05216499_102514 | SAMN05216499_1296 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.999 |
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