STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL94064.1V8-like Glu-specific endopeptidase. (293 aa)    
Predicted Functional Partners:
SHK64345.1
Hypothetical protein.
  
     0.555
SHL94030.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
       0.543
SHM90046.1
Uncharacterized membrane protein YhaH, DUF805 family.
   
    0.485
SHN37226.1
Aromatase.
  
     0.471
SHL07725.1
N-acetylmuramoyl-L-alanine amidase.
  
  
  0.460
SHL94107.1
Transcriptional regulator, TetR family.
       0.443
SHK76876.1
Molecular chaperone DnaK.
  
 
 0.438
SHN23053.1
Hypothetical protein.
  
     0.437
SHL68278.1
Bifunctional DNA primase/polymerase, N-terminal.
  
     0.411
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.