Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK96329.1 | SHL94936.1 | SAMN05216499_102189 | SAMN05216499_10777 | Hypothetical protein. | Copper chaperone CopZ. | 0.733 |
SHL67978.1 | SHL94900.1 | SAMN05216499_105274 | SAMN05216499_10776 | Copper transport protein. | Cu+-exporting ATPase. | 0.523 |
SHL67978.1 | SHL94936.1 | SAMN05216499_105274 | SAMN05216499_10777 | Copper transport protein. | Copper chaperone CopZ. | 0.625 |
SHL67978.1 | SHN13680.1 | SAMN05216499_105274 | SAMN05216499_12222 | Copper transport protein. | DNA-binding transcriptional regulator, FrmR family. | 0.554 |
SHL67978.1 | SHN35964.1 | SAMN05216499_105274 | SAMN05216499_1458 | Copper transport protein. | Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. | 0.523 |
SHL94900.1 | SHL67978.1 | SAMN05216499_10776 | SAMN05216499_105274 | Cu+-exporting ATPase. | Copper transport protein. | 0.523 |
SHL94900.1 | SHL94936.1 | SAMN05216499_10776 | SAMN05216499_10777 | Cu+-exporting ATPase. | Copper chaperone CopZ. | 0.998 |
SHL94900.1 | SHN13680.1 | SAMN05216499_10776 | SAMN05216499_12222 | Cu+-exporting ATPase. | DNA-binding transcriptional regulator, FrmR family. | 0.603 |
SHL94900.1 | SHN30552.1 | SAMN05216499_10776 | SAMN05216499_1358 | Cu+-exporting ATPase. | Hypothetical protein. | 0.783 |
SHL94936.1 | SHK96329.1 | SAMN05216499_10777 | SAMN05216499_102189 | Copper chaperone CopZ. | Hypothetical protein. | 0.733 |
SHL94936.1 | SHL67978.1 | SAMN05216499_10777 | SAMN05216499_105274 | Copper chaperone CopZ. | Copper transport protein. | 0.625 |
SHL94936.1 | SHL94900.1 | SAMN05216499_10777 | SAMN05216499_10776 | Copper chaperone CopZ. | Cu+-exporting ATPase. | 0.998 |
SHL94936.1 | SHM33022.1 | SAMN05216499_10777 | SAMN05216499_11074 | Copper chaperone CopZ. | Predicted transcriptional regulator. | 0.697 |
SHL94936.1 | SHM81243.1 | SAMN05216499_10777 | SAMN05216499_114162 | Copper chaperone CopZ. | Predicted transcriptional regulator. | 0.740 |
SHL94936.1 | SHN13680.1 | SAMN05216499_10777 | SAMN05216499_12222 | Copper chaperone CopZ. | DNA-binding transcriptional regulator, FrmR family. | 0.622 |
SHL94936.1 | SHN16322.1 | SAMN05216499_10777 | SAMN05216499_12379 | Copper chaperone CopZ. | Predicted transcriptional regulator. | 0.697 |
SHL94936.1 | SHN30552.1 | SAMN05216499_10777 | SAMN05216499_1358 | Copper chaperone CopZ. | Hypothetical protein. | 0.784 |
SHL94936.1 | SHN35964.1 | SAMN05216499_10777 | SAMN05216499_1458 | Copper chaperone CopZ. | Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. | 0.984 |
SHL94936.1 | rplN | SAMN05216499_10777 | SAMN05216499_101141 | Copper chaperone CopZ. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.813 |
SHM33022.1 | SHL94936.1 | SAMN05216499_11074 | SAMN05216499_10777 | Predicted transcriptional regulator. | Copper chaperone CopZ. | 0.697 |
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