STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL94936.1Copper chaperone CopZ. (70 aa)    
Predicted Functional Partners:
SHL94900.1
Cu+-exporting ATPase.
 
 
 0.998
SHN35964.1
Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase.
  
 
 0.984
rplN
LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
    
   0.813
SHN30552.1
Hypothetical protein.
 
   
 0.784
SHM81243.1
Predicted transcriptional regulator.
 
  
 0.740
SHK96329.1
Hypothetical protein.
     
 0.733
SHM33022.1
Predicted transcriptional regulator.
  
  
 0.697
SHN16322.1
Predicted transcriptional regulator.
  
  
 0.697
SHL67978.1
Copper transport protein.
     
 0.625
SHN13680.1
DNA-binding transcriptional regulator, FrmR family.
  
  
 0.622
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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