Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM00351.1 | SHM09586.1 | SAMN05216499_107234 | SAMN05216499_108105 | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | 0.529 |
SHM09540.1 | SHM09586.1 | SAMN05216499_108104 | SAMN05216499_108105 | Cation diffusion facilitator family transporter. | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | 0.436 |
SHM09586.1 | SHM00351.1 | SAMN05216499_108105 | SAMN05216499_107234 | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | 0.529 |
SHM09586.1 | SHM09540.1 | SAMN05216499_108105 | SAMN05216499_108104 | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | Cation diffusion facilitator family transporter. | 0.436 |
SHM09586.1 | SHM09624.1 | SAMN05216499_108105 | SAMN05216499_108106 | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | ATPase components of ABC transporters with duplicated ATPase domains. | 0.570 |
SHM09586.1 | SHM95240.1 | SAMN05216499_108105 | SAMN05216499_11714 | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | Restriction system protein. | 0.414 |
SHM09586.1 | SHN38748.1 | SAMN05216499_108105 | SAMN05216499_1771 | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | Hypothetical protein. | 0.414 |
SHM09624.1 | SHM09586.1 | SAMN05216499_108106 | SAMN05216499_108105 | ATPase components of ABC transporters with duplicated ATPase domains. | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | 0.570 |
SHM95240.1 | SHM09586.1 | SAMN05216499_11714 | SAMN05216499_108105 | Restriction system protein. | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | 0.414 |
SHM95240.1 | SHN38748.1 | SAMN05216499_11714 | SAMN05216499_1771 | Restriction system protein. | Hypothetical protein. | 0.697 |
SHN38748.1 | SHM09586.1 | SAMN05216499_1771 | SAMN05216499_108105 | Hypothetical protein. | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | 0.414 |
SHN38748.1 | SHM95240.1 | SAMN05216499_1771 | SAMN05216499_11714 | Hypothetical protein. | Restriction system protein. | 0.697 |