Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL85253.1 | SHM08088.1 | SAMN05216499_106247 | SAMN05216499_10869 | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | Hypothetical protein. | 0.493 |
SHL85253.1 | SHM58646.1 | SAMN05216499_106247 | SAMN05216499_112102 | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | PRC-barrel domain-containing protein. | 0.493 |
SHL85253.1 | SHN28690.1 | SAMN05216499_106247 | SAMN05216499_13254 | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | PRC-barrel domain-containing protein. | 0.493 |
SHL85253.1 | SHN37825.1 | SAMN05216499_106247 | SAMN05216499_15613 | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | PRC-barrel domain-containing protein. | 0.493 |
SHM08039.1 | SHM08088.1 | SAMN05216499_10868 | SAMN05216499_10869 | ATP-binding cassette, subfamily B. | Hypothetical protein. | 0.432 |
SHM08088.1 | SHL85253.1 | SAMN05216499_10869 | SAMN05216499_106247 | Hypothetical protein. | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.493 |
SHM08088.1 | SHM08039.1 | SAMN05216499_10869 | SAMN05216499_10868 | Hypothetical protein. | ATP-binding cassette, subfamily B. | 0.432 |
SHM08088.1 | SHM58646.1 | SAMN05216499_10869 | SAMN05216499_112102 | Hypothetical protein. | PRC-barrel domain-containing protein. | 0.757 |
SHM08088.1 | SHN02957.1 | SAMN05216499_10869 | SAMN05216499_118136 | Hypothetical protein. | Osmoprotectant transport system substrate-binding protein. | 0.522 |
SHM08088.1 | SHN28690.1 | SAMN05216499_10869 | SAMN05216499_13254 | Hypothetical protein. | PRC-barrel domain-containing protein. | 0.830 |
SHM08088.1 | SHN37825.1 | SAMN05216499_10869 | SAMN05216499_15613 | Hypothetical protein. | PRC-barrel domain-containing protein. | 0.510 |
SHM58646.1 | SHL85253.1 | SAMN05216499_112102 | SAMN05216499_106247 | PRC-barrel domain-containing protein. | Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family. | 0.493 |
SHM58646.1 | SHM08088.1 | SAMN05216499_112102 | SAMN05216499_10869 | PRC-barrel domain-containing protein. | Hypothetical protein. | 0.757 |
SHM58646.1 | SHN02957.1 | SAMN05216499_112102 | SAMN05216499_118136 | PRC-barrel domain-containing protein. | Osmoprotectant transport system substrate-binding protein. | 0.522 |
SHM58646.1 | SHN28690.1 | SAMN05216499_112102 | SAMN05216499_13254 | PRC-barrel domain-containing protein. | PRC-barrel domain-containing protein. | 0.841 |
SHM58646.1 | SHN37825.1 | SAMN05216499_112102 | SAMN05216499_15613 | PRC-barrel domain-containing protein. | PRC-barrel domain-containing protein. | 0.500 |
SHN02957.1 | SHM08088.1 | SAMN05216499_118136 | SAMN05216499_10869 | Osmoprotectant transport system substrate-binding protein. | Hypothetical protein. | 0.522 |
SHN02957.1 | SHM58646.1 | SAMN05216499_118136 | SAMN05216499_112102 | Osmoprotectant transport system substrate-binding protein. | PRC-barrel domain-containing protein. | 0.522 |
SHN02957.1 | SHN28690.1 | SAMN05216499_118136 | SAMN05216499_13254 | Osmoprotectant transport system substrate-binding protein. | PRC-barrel domain-containing protein. | 0.522 |
SHN02957.1 | SHN37825.1 | SAMN05216499_118136 | SAMN05216499_15613 | Osmoprotectant transport system substrate-binding protein. | PRC-barrel domain-containing protein. | 0.522 |
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