Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL01738.1 | SHM08264.1 | SAMN05216499_102330 | SAMN05216499_10873 | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | TIGR04222 domain-containing protein. | 0.404 |
SHL01738.1 | SHN11577.1 | SAMN05216499_102330 | SAMN05216499_12146 | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | Hypothetical protein. | 0.557 |
SHL38576.1 | SHM08264.1 | SAMN05216499_1045 | SAMN05216499_10873 | ABC-2 type transport system ATP-binding protein. | TIGR04222 domain-containing protein. | 0.405 |
SHM08224.1 | SHM08264.1 | SAMN05216499_10872 | SAMN05216499_10873 | Ca2+-binding protein, EF-hand superfamily. | TIGR04222 domain-containing protein. | 0.542 |
SHM08224.1 | SHM08314.1 | SAMN05216499_10872 | SAMN05216499_10874 | Ca2+-binding protein, EF-hand superfamily. | Hypothetical protein. | 0.470 |
SHM08224.1 | SHM08351.1 | SAMN05216499_10872 | SAMN05216499_10875 | Ca2+-binding protein, EF-hand superfamily. | Hypothetical protein. | 0.419 |
SHM08224.1 | SHN11577.1 | SAMN05216499_10872 | SAMN05216499_12146 | Ca2+-binding protein, EF-hand superfamily. | Hypothetical protein. | 0.463 |
SHM08264.1 | SHL01738.1 | SAMN05216499_10873 | SAMN05216499_102330 | TIGR04222 domain-containing protein. | Tricorn protease; Degrades oligopeptides; Belongs to the peptidase S41B family. | 0.404 |
SHM08264.1 | SHL38576.1 | SAMN05216499_10873 | SAMN05216499_1045 | TIGR04222 domain-containing protein. | ABC-2 type transport system ATP-binding protein. | 0.405 |
SHM08264.1 | SHM08224.1 | SAMN05216499_10873 | SAMN05216499_10872 | TIGR04222 domain-containing protein. | Ca2+-binding protein, EF-hand superfamily. | 0.542 |
SHM08264.1 | SHM08314.1 | SAMN05216499_10873 | SAMN05216499_10874 | TIGR04222 domain-containing protein. | Hypothetical protein. | 0.925 |
SHM08264.1 | SHM08351.1 | SAMN05216499_10873 | SAMN05216499_10875 | TIGR04222 domain-containing protein. | Hypothetical protein. | 0.773 |
SHM08264.1 | SHM13028.1 | SAMN05216499_10873 | SAMN05216499_108195 | TIGR04222 domain-containing protein. | Regulatory protein, luxR family. | 0.689 |
SHM08264.1 | SHM54834.1 | SAMN05216499_10873 | SAMN05216499_1123 | TIGR04222 domain-containing protein. | ATPase components of ABC transporters with duplicated ATPase domains. | 0.429 |
SHM08264.1 | SHM80410.1 | SAMN05216499_10873 | SAMN05216499_114135 | TIGR04222 domain-containing protein. | Streptomyces sporulation and cell division protein, SsgA. | 0.458 |
SHM08264.1 | SHN11577.1 | SAMN05216499_10873 | SAMN05216499_12146 | TIGR04222 domain-containing protein. | Hypothetical protein. | 0.419 |
SHM08264.1 | SHN29437.1 | SAMN05216499_10873 | SAMN05216499_13343 | TIGR04222 domain-containing protein. | Regulatory protein, luxR family. | 0.668 |
SHM08314.1 | SHM08224.1 | SAMN05216499_10874 | SAMN05216499_10872 | Hypothetical protein. | Ca2+-binding protein, EF-hand superfamily. | 0.470 |
SHM08314.1 | SHM08264.1 | SAMN05216499_10874 | SAMN05216499_10873 | Hypothetical protein. | TIGR04222 domain-containing protein. | 0.925 |
SHM08314.1 | SHM08351.1 | SAMN05216499_10874 | SAMN05216499_10875 | Hypothetical protein. | Hypothetical protein. | 0.773 |
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