STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM08766.1Phosphoesterase family protein. (888 aa)    
Predicted Functional Partners:
SHM08803.1
ABC-2 type transport system permease protein.
 
    0.913
SHM08854.1
ABC-2 type transport system ATP-binding protein.
 
    0.905
SHL86431.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor.
  
 0.876
SHM19547.1
Right handed beta helix region.
  
 0.876
SHL82262.1
Glutamate synthase (NADH) large subunit.
    
  0.859
SHL42605.1
Plastocyanin.
   
   0.787
SHN30489.1
Hypothetical protein.
 
    0.777
SHM45064.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.728
SHK96559.1
6-phosphogluconolactonase, cycloisomerase 2 family.
  
     0.715
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.703
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.