STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM21042.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (460 aa)    
Predicted Functional Partners:
SHM20938.1
Multiple sugar transport system permease protein.
 
 0.999
SHM20984.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
   0.986
SHM32398.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.864
SHN14482.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.864
SHM60422.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
 0.835
SHM20889.1
Alpha-mannosidase.
 
     0.833
SHM77838.1
N-acetylglucosamine transport system permease protein.
 
 0.833
SHM86531.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
 0.808
SHN33453.1
Arabinogalactan oligomer / maltooligosaccharide transport system permease protein.
  
 0.790
SHM60454.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.781
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.