STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM21838.1FCD domain-containing protein. (153 aa)    
Predicted Functional Partners:
SHM21805.1
4-hydroxy-tetrahydrodipicolinate synthase.
 
     0.948
SHN36042.1
Peptide/nickel transport system permease protein.
       0.603
SHM08434.1
Protein of unknown function.
       0.579
SHN34149.1
Ferredoxin-NADP reductase.
  
 
  0.578
SHN01314.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
  0.576
SHM21424.1
ADP-ribosylglycohydrolase.
 
     0.531
SHM21374.1
ADP-ribosylglycohydrolase.
 
     0.506
SHM21463.1
ADP-ribosylglycohydrolase.
 
     0.495
SHM21549.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
    0.481
SHM21759.1
4-hydroxy-tetrahydrodipicolinate synthase.
       0.448
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.