STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM23754.1Zn-dependent protease with chaperone function. (527 aa)    
Predicted Functional Partners:
SHM34576.1
Hypothetical protein.
  
 
   0.658
SHM34644.1
Predicted metal-dependent peptidase.
  
    0.645
SHM75605.1
Alginate lyase.
  
 
   0.603
SHM34612.1
AAA domain (dynein-related subfamily).
  
     0.591
SHN38520.1
Protein of unknown function.
  
 
   0.563
SHM33937.1
Hypothetical protein.
 
     0.543
SHM90108.1
Lamin Tail Domain.
  
     0.533
SHN11733.1
Transcriptional regulator, ArsR family.
  
     0.519
ftsH
Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 
 0.481
SHN20484.1
ATP-dependent DNA helicase RecG.
   
    0.481
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.