STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM24591.1Hypothetical protein. (144 aa)    
Predicted Functional Partners:
SHL66002.1
Protein of unknown function.
  
     0.548
SHK78754.1
Protein of unknown function.
  
     0.503
SHL27736.1
Hypothetical protein.
  
     0.464
SHN29781.1
PKD domain-containing protein.
  
     0.460
SHK69983.1
Hypothetical protein.
  
     0.448
SHL28215.1
Right handed beta helix region.
  
     0.446
SHM98500.1
PKD repeat-containing protein.
  
     0.442
SHN35733.1
Hypothetical protein.
  
     0.434
SHM43697.1
Hypothetical protein.
  
     0.418
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.