Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK66659.1 | SHM25393.1 | SAMN05216499_101314 | SAMN05216499_109209 | Adenylate cyclase. | Radical SAM additional 4Fe4S-binding SPASM domain-containing protein. | 0.617 |
SHK66659.1 | SHM51173.1 | SAMN05216499_101314 | SAMN05216499_111213 | Adenylate cyclase. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.914 |
SHK66659.1 | SHM72040.1 | SAMN05216499_101314 | SAMN05216499_113170 | Adenylate cyclase. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.821 |
SHK66659.1 | SHN25216.1 | SAMN05216499_101314 | SAMN05216499_1296 | Adenylate cyclase. | Signal transduction histidine kinase. | 0.997 |
SHK66659.1 | moaA | SAMN05216499_101314 | SAMN05216499_10637 | Adenylate cyclase. | Cyclic pyranopterin monophosphate synthase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | 0.918 |
SHK66659.1 | ribBA | SAMN05216499_101314 | SAMN05216499_13242 | Adenylate cyclase. | GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.915 |
SHM11972.1 | SHM25393.1 | SAMN05216499_108166 | SAMN05216499_109209 | Amino acid adenylation domain-containing protein. | Radical SAM additional 4Fe4S-binding SPASM domain-containing protein. | 0.695 |
SHM11972.1 | SHM51173.1 | SAMN05216499_108166 | SAMN05216499_111213 | Amino acid adenylation domain-containing protein. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.543 |
SHM11972.1 | SHM72040.1 | SAMN05216499_108166 | SAMN05216499_113170 | Amino acid adenylation domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.538 |
SHM11972.1 | SHN25216.1 | SAMN05216499_108166 | SAMN05216499_1296 | Amino acid adenylation domain-containing protein. | Signal transduction histidine kinase. | 0.987 |
SHM11972.1 | SHN30894.1 | SAMN05216499_108166 | SAMN05216499_13539 | Amino acid adenylation domain-containing protein. | Hopanoid biosynthesis associated radical SAM protein HpnH. | 0.695 |
SHM11972.1 | hemH | SAMN05216499_108166 | SAMN05216499_12554 | Amino acid adenylation domain-containing protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.403 |
SHM25393.1 | SHK66659.1 | SAMN05216499_109209 | SAMN05216499_101314 | Radical SAM additional 4Fe4S-binding SPASM domain-containing protein. | Adenylate cyclase. | 0.617 |
SHM25393.1 | SHM11972.1 | SAMN05216499_109209 | SAMN05216499_108166 | Radical SAM additional 4Fe4S-binding SPASM domain-containing protein. | Amino acid adenylation domain-containing protein. | 0.695 |
SHM25393.1 | SHM51173.1 | SAMN05216499_109209 | SAMN05216499_111213 | Radical SAM additional 4Fe4S-binding SPASM domain-containing protein. | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.620 |
SHM25393.1 | SHM72040.1 | SAMN05216499_109209 | SAMN05216499_113170 | Radical SAM additional 4Fe4S-binding SPASM domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.547 |
SHM25393.1 | SHN25216.1 | SAMN05216499_109209 | SAMN05216499_1296 | Radical SAM additional 4Fe4S-binding SPASM domain-containing protein. | Signal transduction histidine kinase. | 0.555 |
SHM25393.1 | SHN30894.1 | SAMN05216499_109209 | SAMN05216499_13539 | Radical SAM additional 4Fe4S-binding SPASM domain-containing protein. | Hopanoid biosynthesis associated radical SAM protein HpnH. | 0.590 |
SHM25393.1 | hemH | SAMN05216499_109209 | SAMN05216499_12554 | Radical SAM additional 4Fe4S-binding SPASM domain-containing protein. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.732 |
SHM25393.1 | moaA | SAMN05216499_109209 | SAMN05216499_10637 | Radical SAM additional 4Fe4S-binding SPASM domain-containing protein. | Cyclic pyranopterin monophosphate synthase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. | 0.701 |
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