STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM19477.1Mannan endo-1,4-beta-mannosidase. (534 aa)    
Predicted Functional Partners:
SHM46911.1
Endoglucanase.
 
 
0.905
SHK70549.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.783
SHN24189.1
Protein of unknown function.
  
 
 0.755
SHM38399.1
Alpha galactosidase A.
 
  
  0.741
SHL19678.1
Chitinase.
     
 0.705
SHL49867.1
Hypothetical protein.
    
 0.692
SHN29160.1
Glycosyl hydrolase family 26; Belongs to the glycosyl hydrolase 26 family.
    
 0.692
SHN29183.1
Beta-mannanase; Belongs to the glycosyl hydrolase 26 family.
    
 0.692
SHN29217.1
Glycosyl hydrolase family 26; Belongs to the glycosyl hydrolase 26 family.
   
 0.692
SHK94689.1
Beta-1,3-glucanase.
 
  0.670
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.