STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM20041.1Beta-xylosidase. (795 aa)    
Predicted Functional Partners:
SHL52140.1
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
  
  0.924
SHL96857.1
Cellulose 1,4-beta-cellobiosidase; Belongs to the glycosyl hydrolase family 6.
     
  0.913
SHM20084.1
Xylobiose ABC transporter membrane protein.
       0.886
SHM20130.1
Xylobiose ABC transporter membrane protein.
       0.886
SHN08861.1
Beta-glucosidase.
  
  
 
0.848
SHN34974.1
Beta-glucosidase; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.848
SHL66043.1
Beta-glucosidase.
  
  
 
0.846
SHM17259.1
Beta-glucosidase.
  
  
 
0.839
SHM20163.1
Xylobiose-binding protein.
 
     0.833
SHL44238.1
Endoglucanase; Belongs to the glycosyl hydrolase family 6.
     
 0.805
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.