STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM35728.1Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. (486 aa)    
Predicted Functional Partners:
SHM11972.1
Amino acid adenylation domain-containing protein.
 
 0.995
SHM86439.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
 0.958
SHM35340.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
  
  0.943
SHN38408.1
Alcohol dehydrogenase GroES-like domain-containing protein.
 
 0.932
SHM35612.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
 
 0.930
SHM11780.1
Acyl transferase domain-containing protein.
  
 0.922
SHM35460.1
Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family.
 
    0.911
SHM12693.1
AMP-binding enzyme.
  
 0.895
SHN29467.1
Acyl transferase domain-containing protein.
  
 0.890
SHN38713.1
Polyketide synthase dehydratase.
 
 0.889
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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