Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK67554.1 | SHL48430.1 | SAMN05216499_101339 | SAMN05216499_104244 | L-threonine ammonia-lyase. | L-threonine aldolase. | 0.929 |
SHK67554.1 | SHM31219.1 | SAMN05216499_101339 | SAMN05216499_11023 | L-threonine ammonia-lyase. | Threonine synthase. | 0.981 |
SHK67554.1 | SHM71869.1 | SAMN05216499_101339 | SAMN05216499_113166 | L-threonine ammonia-lyase. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.924 |
SHK67554.1 | SHN16173.1 | SAMN05216499_101339 | SAMN05216499_12367 | L-threonine ammonia-lyase. | L-threonine aldolase. | 0.929 |
SHK67554.1 | SHN35304.1 | SAMN05216499_101339 | SAMN05216499_14313 | L-threonine ammonia-lyase. | Homoserine dehydrogenase. | 0.887 |
SHK67554.1 | SHN35313.1 | SAMN05216499_101339 | SAMN05216499_14314 | L-threonine ammonia-lyase. | L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | 0.985 |
SHK67554.1 | leuD | SAMN05216499_101339 | SAMN05216499_113138 | L-threonine ammonia-lyase. | 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily. | 0.677 |
SHK67554.1 | thrB | SAMN05216499_101339 | SAMN05216499_14315 | L-threonine ammonia-lyase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.846 |
SHL48430.1 | SHK67554.1 | SAMN05216499_104244 | SAMN05216499_101339 | L-threonine aldolase. | L-threonine ammonia-lyase. | 0.929 |
SHL48430.1 | SHM31219.1 | SAMN05216499_104244 | SAMN05216499_11023 | L-threonine aldolase. | Threonine synthase. | 0.931 |
SHL48430.1 | SHM71869.1 | SAMN05216499_104244 | SAMN05216499_113166 | L-threonine aldolase. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.412 |
SHL48430.1 | SHN35313.1 | SAMN05216499_104244 | SAMN05216499_14314 | L-threonine aldolase. | L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | 0.949 |
SHL48430.1 | thrB | SAMN05216499_104244 | SAMN05216499_14315 | L-threonine aldolase. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.497 |
SHM31186.1 | SHM31219.1 | SAMN05216499_11022 | SAMN05216499_11023 | Molybdopterin synthase subunit MoaD. | Threonine synthase. | 0.966 |
SHM31219.1 | SHK67554.1 | SAMN05216499_11023 | SAMN05216499_101339 | Threonine synthase. | L-threonine ammonia-lyase. | 0.981 |
SHM31219.1 | SHL48430.1 | SAMN05216499_11023 | SAMN05216499_104244 | Threonine synthase. | L-threonine aldolase. | 0.931 |
SHM31219.1 | SHM31186.1 | SAMN05216499_11023 | SAMN05216499_11022 | Threonine synthase. | Molybdopterin synthase subunit MoaD. | 0.966 |
SHM31219.1 | SHM71869.1 | SAMN05216499_11023 | SAMN05216499_113166 | Threonine synthase. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.790 |
SHM31219.1 | SHN16173.1 | SAMN05216499_11023 | SAMN05216499_12367 | Threonine synthase. | L-threonine aldolase. | 0.931 |
SHM31219.1 | SHN35304.1 | SAMN05216499_11023 | SAMN05216499_14313 | Threonine synthase. | Homoserine dehydrogenase. | 0.937 |
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