STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM32039.1Putative esterase. (371 aa)    
Predicted Functional Partners:
SHM31997.1
lysyl-tRNA synthetase, class 2.
 
   
 0.937
SHL40203.1
S-(hydroxymethyl)mycothiol dehydrogenase.
  
 0.921
SHN12052.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase.
  
 0.921
SHM31846.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase.
       0.768
SHM31886.1
Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
       0.768
SHM31924.1
Ketosteroid isomerase homolog.
       0.768
SHM31958.1
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
       0.768
SHM31818.1
Protein of unknown function.
       0.735
SHL87206.1
lysyl-tRNA synthetase, class 2.
 
   
 0.731
SHM31725.1
Hypothetical protein.
       0.662
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.