STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM32985.1Peptidase family M48. (303 aa)    
Predicted Functional Partners:
SHM33022.1
Predicted transcriptional regulator.
 
 
  0.956
SHN16322.1
Predicted transcriptional regulator.
 
 
  0.751
SHM81243.1
Predicted transcriptional regulator.
 
 
  0.741
SHL48196.1
Peptidase family M48.
  
     0.689
SHM33060.1
Membrane-associated protein.
       0.607
SHM33095.1
Undecaprenyl-diphosphatase.
       0.577
SHM32875.1
Protein of unknown function.
 
     0.569
SHN00765.1
Hypothetical protein.
  
     0.537
SHM32942.1
Uncharacterized conserved protein.
 
     0.482
SHN06088.1
Streptomyces sporulation and cell division protein, SsgA.
  
     0.476
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.