Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK67396.1 | SHM33937.1 | SAMN05216499_101335 | SAMN05216499_11098 | Cystathionine gamma-lyase. | Hypothetical protein. | 0.603 |
SHK67396.1 | SHN25216.1 | SAMN05216499_101335 | SAMN05216499_1296 | Cystathionine gamma-lyase. | Signal transduction histidine kinase. | 0.721 |
SHK69077.1 | SHM33937.1 | SAMN05216499_101379 | SAMN05216499_11098 | Transglycosylase SLT domain-containing protein. | Hypothetical protein. | 0.787 |
SHK69077.1 | SHN25216.1 | SAMN05216499_101379 | SAMN05216499_1296 | Transglycosylase SLT domain-containing protein. | Signal transduction histidine kinase. | 0.926 |
SHM33937.1 | SHK67396.1 | SAMN05216499_11098 | SAMN05216499_101335 | Hypothetical protein. | Cystathionine gamma-lyase. | 0.603 |
SHM33937.1 | SHK69077.1 | SAMN05216499_11098 | SAMN05216499_101379 | Hypothetical protein. | Transglycosylase SLT domain-containing protein. | 0.787 |
SHM33937.1 | SHM33973.1 | SAMN05216499_11098 | SAMN05216499_11099 | Hypothetical protein. | Zn-dependent protease with chaperone function. | 0.898 |
SHM33937.1 | SHM34176.1 | SAMN05216499_11098 | SAMN05216499_110104 | Hypothetical protein. | ABC-type branched-chain amino acid transport system, substrate-binding protein. | 0.623 |
SHM33937.1 | SHM34576.1 | SAMN05216499_11098 | SAMN05216499_110114 | Hypothetical protein. | Hypothetical protein. | 0.709 |
SHM33937.1 | SHM34612.1 | SAMN05216499_11098 | SAMN05216499_110115 | Hypothetical protein. | AAA domain (dynein-related subfamily). | 0.682 |
SHM33937.1 | SHM34644.1 | SAMN05216499_11098 | SAMN05216499_110116 | Hypothetical protein. | Predicted metal-dependent peptidase. | 0.721 |
SHM33937.1 | SHM62483.1 | SAMN05216499_11098 | SAMN05216499_112207 | Hypothetical protein. | FhuF 2Fe-2S C-terminal domain-containing protein. | 0.618 |
SHM33937.1 | SHN25216.1 | SAMN05216499_11098 | SAMN05216499_1296 | Hypothetical protein. | Signal transduction histidine kinase. | 0.899 |
SHM33937.1 | ribBA | SAMN05216499_11098 | SAMN05216499_13242 | Hypothetical protein. | GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.713 |
SHM33973.1 | SHM33937.1 | SAMN05216499_11099 | SAMN05216499_11098 | Zn-dependent protease with chaperone function. | Hypothetical protein. | 0.898 |
SHM33973.1 | SHM34576.1 | SAMN05216499_11099 | SAMN05216499_110114 | Zn-dependent protease with chaperone function. | Hypothetical protein. | 0.679 |
SHM33973.1 | SHM34612.1 | SAMN05216499_11099 | SAMN05216499_110115 | Zn-dependent protease with chaperone function. | AAA domain (dynein-related subfamily). | 0.613 |
SHM33973.1 | SHM34644.1 | SAMN05216499_11099 | SAMN05216499_110116 | Zn-dependent protease with chaperone function. | Predicted metal-dependent peptidase. | 0.670 |
SHM34176.1 | SHM33937.1 | SAMN05216499_110104 | SAMN05216499_11098 | ABC-type branched-chain amino acid transport system, substrate-binding protein. | Hypothetical protein. | 0.623 |
SHM34176.1 | SHN25216.1 | SAMN05216499_110104 | SAMN05216499_1296 | ABC-type branched-chain amino acid transport system, substrate-binding protein. | Signal transduction histidine kinase. | 0.771 |
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