STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM45180.1Peptide/nickel transport system substrate-binding protein. (526 aa)    
Predicted Functional Partners:
SHM45253.1
Peptide/nickel transport system permease protein.
 
  0.951
SHM45216.1
Peptide/nickel transport system permease protein.
 
  0.948
SHM45327.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.840
SHM45290.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.828
SHN07986.1
Peptide/nickel transport system substrate-binding protein.
  
  
 
0.812
SHN20585.1
Peptide/nickel transport system permease protein.
 
  0.798
SHK71297.1
Oligopeptide transport system permease protein.
 
  0.795
SHK71087.1
Oligopeptide transport system permease protein.
 
  0.789
SHK71355.1
Oligopeptide transport system permease protein.
 
  0.783
SHK71119.1
Oligopeptide transport system permease protein.
 
  0.782
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.