SHM46026.1 protein (Streptomyces paucisporeus)

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Score

SHM46026.1

Proteasome accessory factor B. (312 aa)

Predicted Functional Partners:

SHM46065.1

0.998

rpoZ

0.940

rbpA-2

0.938

rpoB

0.923

rpoC

0.919

rpoA

0.919

pafA

0.838

SHL04140.1

0.818

SHL95617.1

0.818

sigA

0.818

Your Current Organism:

Streptomyces paucisporeus

NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SHL04140.1	SHM46026.1	SAMN05216499_102389	SAMN05216499_11181	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Proteasome accessory factor B.	0.818
SHL04140.1	SHM46065.1	SAMN05216499_102389	SAMN05216499_11182	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Proteasome accessory factor C.	0.818
SHL04140.1	rbpA-2	SAMN05216499_102389	SAMN05216499_13218	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.	0.999
SHL04140.1	rpoA	SAMN05216499_102389	SAMN05216499_101159	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
SHL04140.1	rpoB	SAMN05216499_102389	SAMN05216499_101101	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
SHL04140.1	rpoC	SAMN05216499_102389	SAMN05216499_101102	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
SHL04140.1	rpoZ	SAMN05216499_102389	SAMN05216499_14031	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.999
SHL95617.1	SHM46026.1	SAMN05216499_10797	SAMN05216499_11181	RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Proteasome accessory factor B.	0.818
SHL95617.1	SHM46065.1	SAMN05216499_10797	SAMN05216499_11182	RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Proteasome accessory factor C.	0.818
SHL95617.1	rbpA-2	SAMN05216499_10797	SAMN05216499_13218	RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.	0.999
SHL95617.1	rpoA	SAMN05216499_10797	SAMN05216499_101159	RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
SHL95617.1	rpoB	SAMN05216499_10797	SAMN05216499_101101	RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
SHL95617.1	rpoC	SAMN05216499_10797	SAMN05216499_101102	RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
SHL95617.1	rpoZ	SAMN05216499_10797	SAMN05216499_14031	RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.999
SHM46026.1	SHL04140.1	SAMN05216499_11181	SAMN05216499_102389	Proteasome accessory factor B.	RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.818
SHM46026.1	SHL95617.1	SAMN05216499_11181	SAMN05216499_10797	Proteasome accessory factor B.	RNA polymerase sigma factor, sigma-70 family; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.818
SHM46026.1	SHM46065.1	SAMN05216499_11181	SAMN05216499_11182	Proteasome accessory factor B.	Proteasome accessory factor C.	0.998
SHM46026.1	pafA	SAMN05216499_11181	SAMN05216499_11178	Proteasome accessory factor B.	Proteasome accessory factor A; Catalyzes the covalent attachment of the prokaryotic ubiquitin-like protein modifier Pup to the proteasomal substrate proteins, thereby targeting them for proteasomal degradation. This tagging system is termed pupylation. The ligation reaction involves the side-chain carboxylate of the C-terminal glutamate of Pup and the side- chain amino group of a substrate lysine.	0.838
SHM46026.1	rbpA-2	SAMN05216499_11181	SAMN05216499_13218	Proteasome accessory factor B.	RNA polymerase-binding protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.	0.938
SHM46026.1	rpoA	SAMN05216499_11181	SAMN05216499_101159	Proteasome accessory factor B.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.919