STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM58583.1Protein of unknown function. (258 aa)    
Predicted Functional Partners:
SHM58616.1
Uncharacterized membrane protein YphA, DoxX/SURF4 family.
       0.773
SHM08224.1
Ca2+-binding protein, EF-hand superfamily.
  
     0.733
SHL06890.1
Cyclic nucleotide-binding domain-containing protein.
  
     0.701
SHL84876.1
Germacradienol/geosmin synthase.
  
     0.698
SHM58542.1
Hypothetical protein.
       0.689
SHM78843.1
Geranyl diphosphate 2-C-methyltransferase.
  
     0.668
SHN19548.1
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
     0.599
SHM58646.1
PRC-barrel domain-containing protein.
       0.576
SHM34176.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
  
     0.564
SHN30586.1
Pentapeptide repeat-containing protein.
  
     0.554
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
Server load: low (26%) [HD]