STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM59621.15-deoxyglucuronate isomerase. (290 aa)    
Predicted Functional Partners:
SHM59649.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase; Belongs to the TPP enzyme family.
 
 
 0.999
SHM59585.1
5-dehydro-2-deoxygluconokinase.
 
 
 0.998
SHM59553.1
Inosose dehydratase.
 
  
 0.987
SHM59525.1
Myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase.
 
  
 0.980
SHM59496.1
Transcriptional regulator, GntR family.
 
     0.934
SHM59458.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
 
    0.931
SHM59392.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
    0.922
SHM59427.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
    0.920
SHL01941.1
Sugar or nucleoside kinase, ribokinase family.
 
 
 0.893
SHM67466.1
Methylmalonate-semialdehyde dehydrogenase [acylating].
 
  
 0.867
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
Server load: low (16%) [HD]