Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL10689.1 | SHM30617.1 | SAMN05216499_102560 | SAMN05216499_1108 | Oleandomycin transport system permease protein. | Lipooligosaccharide transport system permease protein. | 0.456 |
SHL10689.1 | SHM61222.1 | SAMN05216499_102560 | SAMN05216499_112173 | Oleandomycin transport system permease protein. | ABC-2 type transport system permease protein. | 0.506 |
SHL10689.1 | SHM61260.1 | SAMN05216499_102560 | SAMN05216499_112174 | Oleandomycin transport system permease protein. | ABC-type multidrug transport system, ATPase component. | 0.561 |
SHM30617.1 | SHL10689.1 | SAMN05216499_1108 | SAMN05216499_102560 | Lipooligosaccharide transport system permease protein. | Oleandomycin transport system permease protein. | 0.456 |
SHM30617.1 | SHM61222.1 | SAMN05216499_1108 | SAMN05216499_112173 | Lipooligosaccharide transport system permease protein. | ABC-2 type transport system permease protein. | 0.638 |
SHM30617.1 | SHM61260.1 | SAMN05216499_1108 | SAMN05216499_112174 | Lipooligosaccharide transport system permease protein. | ABC-type multidrug transport system, ATPase component. | 0.603 |
SHM61179.1 | SHM61222.1 | SAMN05216499_112172 | SAMN05216499_112173 | Ribosomal protein S12 methylthiotransferase accessory factor. | ABC-2 type transport system permease protein. | 0.919 |
SHM61179.1 | SHM61260.1 | SAMN05216499_112172 | SAMN05216499_112174 | Ribosomal protein S12 methylthiotransferase accessory factor. | ABC-type multidrug transport system, ATPase component. | 0.884 |
SHM61179.1 | SHM61293.1 | SAMN05216499_112172 | SAMN05216499_112175 | Ribosomal protein S12 methylthiotransferase accessory factor. | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | 0.975 |
SHM61179.1 | SHM61327.1 | SAMN05216499_112172 | SAMN05216499_112176 | Ribosomal protein S12 methylthiotransferase accessory factor. | Lantibiotic dehydratase, C terminus. | 0.955 |
SHM61179.1 | SHM61376.1 | SAMN05216499_112172 | SAMN05216499_112177 | Ribosomal protein S12 methylthiotransferase accessory factor. | SagB-type dehydrogenase domain-containing protein. | 0.955 |
SHM61179.1 | SHM61413.1 | SAMN05216499_112172 | SAMN05216499_112178 | Ribosomal protein S12 methylthiotransferase accessory factor. | Ribosomal protein S12 methylthiotransferase accessory factor. | 0.529 |
SHM61179.1 | SHM61449.1 | SAMN05216499_112172 | SAMN05216499_112179 | Ribosomal protein S12 methylthiotransferase accessory factor. | Bacteriocin biosynthesis cyclodehydratase domain-containing protein. | 0.891 |
SHM61179.1 | SHM61491.1 | SAMN05216499_112172 | SAMN05216499_112180 | Ribosomal protein S12 methylthiotransferase accessory factor. | DNA-binding transcriptional activator of the SARP family. | 0.800 |
SHM61222.1 | SHL10689.1 | SAMN05216499_112173 | SAMN05216499_102560 | ABC-2 type transport system permease protein. | Oleandomycin transport system permease protein. | 0.506 |
SHM61222.1 | SHM30617.1 | SAMN05216499_112173 | SAMN05216499_1108 | ABC-2 type transport system permease protein. | Lipooligosaccharide transport system permease protein. | 0.638 |
SHM61222.1 | SHM61179.1 | SAMN05216499_112173 | SAMN05216499_112172 | ABC-2 type transport system permease protein. | Ribosomal protein S12 methylthiotransferase accessory factor. | 0.919 |
SHM61222.1 | SHM61260.1 | SAMN05216499_112173 | SAMN05216499_112174 | ABC-2 type transport system permease protein. | ABC-type multidrug transport system, ATPase component. | 0.957 |
SHM61222.1 | SHM61293.1 | SAMN05216499_112173 | SAMN05216499_112175 | ABC-2 type transport system permease protein. | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | 0.955 |
SHM61222.1 | SHM61327.1 | SAMN05216499_112173 | SAMN05216499_112176 | ABC-2 type transport system permease protein. | Lantibiotic dehydratase, C terminus. | 0.901 |
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