STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM61327.1Lantibiotic dehydratase, C terminus. (929 aa)    
Predicted Functional Partners:
SHM61293.1
Thiopeptide-type bacteriocin biosynthesis domain-containing protein.
 
  
 0.963
SHM61179.1
Ribosomal protein S12 methylthiotransferase accessory factor.
 
  
 0.955
SHM61376.1
SagB-type dehydrogenase domain-containing protein.
 
  
 0.933
SHM61222.1
ABC-2 type transport system permease protein.
 
     0.901
SHM61413.1
Ribosomal protein S12 methylthiotransferase accessory factor.
 
  
 0.896
SHM61449.1
Bacteriocin biosynthesis cyclodehydratase domain-containing protein.
 
     0.896
SHM61260.1
ABC-type multidrug transport system, ATPase component.
 
     0.885
SHM61491.1
DNA-binding transcriptional activator of the SARP family.
 
     0.872
SHM06825.1
Ribosomal protein S12 methylthiotransferase accessory factor.
 
  
 0.658
SHN38131.1
KAP family P-loop domain-containing protein.
  
     0.607
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.