Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK75358.1 | SHM62108.1 | SAMN05216499_101554 | SAMN05216499_112197 | Mycothiol system anti-sigma-R factor. | RNA polymerase sigma factor, sigma-70 family. | 0.508 |
SHL10759.1 | SHM62108.1 | SAMN05216499_102562 | SAMN05216499_112197 | Putative zinc-finger. | RNA polymerase sigma factor, sigma-70 family. | 0.508 |
SHL28421.1 | SHM62108.1 | SAMN05216499_103293 | SAMN05216499_112197 | Hypothetical protein. | RNA polymerase sigma factor, sigma-70 family. | 0.494 |
SHM09126.1 | SHM62075.1 | SAMN05216499_10894 | SAMN05216499_112196 | Hypothetical protein. | Glycosyl hydrolases family 16. | 0.444 |
SHM09126.1 | SHM62108.1 | SAMN05216499_10894 | SAMN05216499_112197 | Hypothetical protein. | RNA polymerase sigma factor, sigma-70 family. | 0.596 |
SHM62075.1 | SHM09126.1 | SAMN05216499_112196 | SAMN05216499_10894 | Glycosyl hydrolases family 16. | Hypothetical protein. | 0.444 |
SHM62075.1 | SHM62108.1 | SAMN05216499_112196 | SAMN05216499_112197 | Glycosyl hydrolases family 16. | RNA polymerase sigma factor, sigma-70 family. | 0.615 |
SHM62108.1 | SHK75358.1 | SAMN05216499_112197 | SAMN05216499_101554 | RNA polymerase sigma factor, sigma-70 family. | Mycothiol system anti-sigma-R factor. | 0.508 |
SHM62108.1 | SHL10759.1 | SAMN05216499_112197 | SAMN05216499_102562 | RNA polymerase sigma factor, sigma-70 family. | Putative zinc-finger. | 0.508 |
SHM62108.1 | SHL28421.1 | SAMN05216499_112197 | SAMN05216499_103293 | RNA polymerase sigma factor, sigma-70 family. | Hypothetical protein. | 0.494 |
SHM62108.1 | SHM09126.1 | SAMN05216499_112197 | SAMN05216499_10894 | RNA polymerase sigma factor, sigma-70 family. | Hypothetical protein. | 0.596 |
SHM62108.1 | SHM62075.1 | SAMN05216499_112197 | SAMN05216499_112196 | RNA polymerase sigma factor, sigma-70 family. | Glycosyl hydrolases family 16. | 0.615 |
SHM62108.1 | SHM77212.1 | SAMN05216499_112197 | SAMN05216499_11448 | RNA polymerase sigma factor, sigma-70 family. | Protein of unknown function. | 0.508 |
SHM62108.1 | rpoA | SAMN05216499_112197 | SAMN05216499_101159 | RNA polymerase sigma factor, sigma-70 family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.510 |
SHM62108.1 | rpoB | SAMN05216499_112197 | SAMN05216499_101101 | RNA polymerase sigma factor, sigma-70 family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.551 |
SHM62108.1 | rpoC | SAMN05216499_112197 | SAMN05216499_101102 | RNA polymerase sigma factor, sigma-70 family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.562 |
SHM62108.1 | rpoZ | SAMN05216499_112197 | SAMN05216499_14031 | RNA polymerase sigma factor, sigma-70 family. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.510 |
SHM77212.1 | SHM62108.1 | SAMN05216499_11448 | SAMN05216499_112197 | Protein of unknown function. | RNA polymerase sigma factor, sigma-70 family. | 0.508 |
rpoA | SHM62108.1 | SAMN05216499_101159 | SAMN05216499_112197 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase sigma factor, sigma-70 family. | 0.510 |
rpoA | rpoB | SAMN05216499_101159 | SAMN05216499_101101 | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
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