STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM57097.1Protein of unknown function. (466 aa)    
Predicted Functional Partners:
SHM57130.1
DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit.
 
     0.847
SHM25187.1
dTDP-L-rhamnose 4-epimerase.
     0.787
SHM57285.1
dTDP-L-rhamnose 4-epimerase.
     0.774
SHM25149.1
Hypothetical protein.
 
     0.761
SHM57211.1
Methyltransferase domain-containing protein.
 
     0.743
SHM57248.1
Hypothetical protein.
 
     0.741
SHM57177.1
Hypothetical protein.
       0.630
SHM57399.1
dTDP-L-rhamnose 4-epimerase.
 
    0.623
SHM25224.1
dTDP-L-rhamnose 4-epimerase.
 
    0.621
SHN34149.1
Ferredoxin-NADP reductase.
  
  
  0.579
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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