Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK70549.1 | SHN25216.1 | SAMN05216499_101423 | SAMN05216499_1296 | Chitinase; Belongs to the glycosyl hydrolase 18 family. | Signal transduction histidine kinase. | 0.464 |
SHK70549.1 | smc | SAMN05216499_101423 | SAMN05216499_113112 | Chitinase; Belongs to the glycosyl hydrolase 18 family. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.963 |
SHK74000.1 | smc | SAMN05216499_101518 | SAMN05216499_113112 | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.831 |
SHM69523.1 | SHM69602.1 | SAMN05216499_113111 | SAMN05216499_113113 | MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | Hypothetical protein. | 0.718 |
SHM69523.1 | SHM69643.1 | SAMN05216499_113111 | SAMN05216499_113114 | MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | Acylphosphatase. | 0.672 |
SHM69523.1 | ftsY | SAMN05216499_113111 | SAMN05216499_113110 | MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.810 |
SHM69523.1 | smc | SAMN05216499_113111 | SAMN05216499_113112 | MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.804 |
SHM69602.1 | SHM69523.1 | SAMN05216499_113113 | SAMN05216499_113111 | Hypothetical protein. | MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.718 |
SHM69602.1 | SHM69643.1 | SAMN05216499_113113 | SAMN05216499_113114 | Hypothetical protein. | Acylphosphatase. | 0.745 |
SHM69602.1 | ftsY | SAMN05216499_113113 | SAMN05216499_113110 | Hypothetical protein. | Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). | 0.607 |
SHM69602.1 | smc | SAMN05216499_113113 | SAMN05216499_113112 | Hypothetical protein. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.763 |
SHM69643.1 | SHM69523.1 | SAMN05216499_113114 | SAMN05216499_113111 | Acylphosphatase. | MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. | 0.672 |
SHM69643.1 | SHM69602.1 | SAMN05216499_113114 | SAMN05216499_113113 | Acylphosphatase. | Hypothetical protein. | 0.745 |
SHM69643.1 | smc | SAMN05216499_113114 | SAMN05216499_113112 | Acylphosphatase. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.806 |
SHN11302.1 | SHN11318.1 | SAMN05216499_12128 | SAMN05216499_12129 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | 0.999 |
SHN11302.1 | smc | SAMN05216499_12128 | SAMN05216499_113112 | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.994 |
SHN11318.1 | SHN11302.1 | SAMN05216499_12129 | SAMN05216499_12128 | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. | 0.999 |
SHN11318.1 | smc | SAMN05216499_12129 | SAMN05216499_113112 | Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.947 |
SHN22114.1 | SHN25216.1 | SAMN05216499_126103 | SAMN05216499_1296 | Acetoin utilization protein AcuC. | Signal transduction histidine kinase. | 0.405 |
SHN22114.1 | smc | SAMN05216499_126103 | SAMN05216499_113112 | Acetoin utilization protein AcuC. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.743 |
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