STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM69733.1Transcriptional regulator, HxlR family. (141 aa)    
Predicted Functional Partners:
SHM69690.1
Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain.
       0.824
SHM69643.1
Acylphosphatase.
       0.756
SHN15647.1
Transcriptional regulator, HxlR family.
  
     0.747
SHM69602.1
Hypothetical protein.
       0.686
SHK78710.1
Transcriptional regulator, HxlR family.
  
     0.620
SHL48801.1
Transcriptional regulator, HxlR family.
  
     0.607
SHL57999.1
PemK-like, MazF-like toxin of type II toxin-antitoxin system.
   
    0.499
smc
Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.433
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.