Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM49613.1 | SHM71830.1 | SAMN05216499_111170 | SAMN05216499_113165 | Hypothetical protein. | PucR C-terminal helix-turn-helix domain-containing protein. | 0.518 |
SHM67335.1 | SHM71830.1 | SAMN05216499_11352 | SAMN05216499_113165 | Purine catabolism regulatory protein. | PucR C-terminal helix-turn-helix domain-containing protein. | 0.595 |
SHM71745.1 | SHM71782.1 | SAMN05216499_113163 | SAMN05216499_113164 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | L-proline dehydrogenase. | 0.996 |
SHM71745.1 | SHM71830.1 | SAMN05216499_113163 | SAMN05216499_113165 | Delta-1-pyrroline-5-carboxylate dehydrogenase. | PucR C-terminal helix-turn-helix domain-containing protein. | 0.775 |
SHM71782.1 | SHM71745.1 | SAMN05216499_113164 | SAMN05216499_113163 | L-proline dehydrogenase. | Delta-1-pyrroline-5-carboxylate dehydrogenase. | 0.996 |
SHM71782.1 | SHM71830.1 | SAMN05216499_113164 | SAMN05216499_113165 | L-proline dehydrogenase. | PucR C-terminal helix-turn-helix domain-containing protein. | 0.803 |
SHM71830.1 | SHM49613.1 | SAMN05216499_113165 | SAMN05216499_111170 | PucR C-terminal helix-turn-helix domain-containing protein. | Hypothetical protein. | 0.518 |
SHM71830.1 | SHM67335.1 | SAMN05216499_113165 | SAMN05216499_11352 | PucR C-terminal helix-turn-helix domain-containing protein. | Purine catabolism regulatory protein. | 0.595 |
SHM71830.1 | SHM71745.1 | SAMN05216499_113165 | SAMN05216499_113163 | PucR C-terminal helix-turn-helix domain-containing protein. | Delta-1-pyrroline-5-carboxylate dehydrogenase. | 0.775 |
SHM71830.1 | SHM71782.1 | SAMN05216499_113165 | SAMN05216499_113164 | PucR C-terminal helix-turn-helix domain-containing protein. | L-proline dehydrogenase. | 0.803 |
SHM71830.1 | SHN27674.1 | SAMN05216499_113165 | SAMN05216499_13148 | PucR C-terminal helix-turn-helix domain-containing protein. | Transcriptional regulator, CdaR family. | 0.507 |
SHN27674.1 | SHM71830.1 | SAMN05216499_13148 | SAMN05216499_113165 | Transcriptional regulator, CdaR family. | PucR C-terminal helix-turn-helix domain-containing protein. | 0.507 |