STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM66287.1Type VII secretion-associated serine protease mycosin. (464 aa)    
Predicted Functional Partners:
SHM66319.1
Uncharacterized conserved protein YukE.
   
  0.904
SHK56666.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.821
SHM65959.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
  
 
 0.821
SHM66366.1
Hypothetical protein.
       0.805
SHM66397.1
Type VII secretion protein EccB.
   
 0.788
SHM66229.1
WXG100 family type VII secretion target; Belongs to the WXG100 family.
 
   
 0.785
SHM66194.1
Fervidolysin. Serine peptidase. MEROPS family S08A; Belongs to the peptidase S8 family.
 
    
0.774
SHL30244.1
Peptidase inhibitor I9; Belongs to the peptidase S8 family.
  
     0.754
SHN34319.1
Hypothetical protein.
  
 0.672
SHL19464.1
Conserved repeat domain-containing protein.
    
  0.651
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.