STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM80315.1Hypothetical protein. (376 aa)    
Predicted Functional Partners:
SHM12291.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
   
  
 0.598
SHN05081.1
Multicopper oxidase.
   
  
 0.598
SHN32909.1
Serine protease.
  
     0.562
SHM80281.1
Hypothetical protein.
       0.537
SHN31109.1
Putative Ig domain-containing protein.
  
     0.517
SHN01948.1
Putative NADH-flavin reductase.
   
    0.509
SHN36008.1
Putative NADH-flavin reductase.
   
    0.509
trmB
tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
    0.495
SHM09926.1
Hypothetical protein.
   
    0.495
SHL39718.1
Hypothetical protein.
  
     0.479
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.