Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL67978.1 | SHM81042.1 | SAMN05216499_105274 | SAMN05216499_114155 | Copper transport protein. | Putative membrane protein. | 0.466 |
SHL86431.1 | SHL86458.1 | SAMN05216499_106281 | SAMN05216499_106282 | Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor. | Cytochrome c oxidase subunit 3. | 0.999 |
SHL86431.1 | SHL86616.1 | SAMN05216499_106281 | SAMN05216499_106287 | Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor. | Cytochrome c oxidase subunit 2. | 0.999 |
SHL86431.1 | SHM81042.1 | SAMN05216499_106281 | SAMN05216499_114155 | Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor. | Putative membrane protein. | 0.427 |
SHL86458.1 | SHL86431.1 | SAMN05216499_106282 | SAMN05216499_106281 | Cytochrome c oxidase subunit 3. | Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor. | 0.999 |
SHL86458.1 | SHL86616.1 | SAMN05216499_106282 | SAMN05216499_106287 | Cytochrome c oxidase subunit 3. | Cytochrome c oxidase subunit 2. | 0.999 |
SHL86458.1 | SHM81042.1 | SAMN05216499_106282 | SAMN05216499_114155 | Cytochrome c oxidase subunit 3. | Putative membrane protein. | 0.517 |
SHL86616.1 | SHL86431.1 | SAMN05216499_106287 | SAMN05216499_106281 | Cytochrome c oxidase subunit 2. | Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor. | 0.999 |
SHL86616.1 | SHL86458.1 | SAMN05216499_106287 | SAMN05216499_106282 | Cytochrome c oxidase subunit 2. | Cytochrome c oxidase subunit 3. | 0.999 |
SHL86616.1 | SHM81042.1 | SAMN05216499_106287 | SAMN05216499_114155 | Cytochrome c oxidase subunit 2. | Putative membrane protein. | 0.441 |
SHM81042.1 | SHL67978.1 | SAMN05216499_114155 | SAMN05216499_105274 | Putative membrane protein. | Copper transport protein. | 0.466 |
SHM81042.1 | SHL86431.1 | SAMN05216499_114155 | SAMN05216499_106281 | Putative membrane protein. | Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor. | 0.427 |
SHM81042.1 | SHL86458.1 | SAMN05216499_114155 | SAMN05216499_106282 | Putative membrane protein. | Cytochrome c oxidase subunit 3. | 0.517 |
SHM81042.1 | SHL86616.1 | SAMN05216499_114155 | SAMN05216499_106287 | Putative membrane protein. | Cytochrome c oxidase subunit 2. | 0.441 |
SHM81042.1 | SHM81068.1 | SAMN05216499_114155 | SAMN05216499_114156 | Putative membrane protein. | Uncharacterized membrane protein. | 0.972 |
SHM81042.1 | SHM81097.1 | SAMN05216499_114155 | SAMN05216499_114157 | Putative membrane protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.453 |
SHM81068.1 | SHM81042.1 | SAMN05216499_114156 | SAMN05216499_114155 | Uncharacterized membrane protein. | Putative membrane protein. | 0.972 |
SHM81068.1 | SHM81097.1 | SAMN05216499_114156 | SAMN05216499_114157 | Uncharacterized membrane protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.470 |
SHM81097.1 | SHM81042.1 | SAMN05216499_114157 | SAMN05216499_114155 | Serine phosphatase RsbU, regulator of sigma subunit. | Putative membrane protein. | 0.453 |
SHM81097.1 | SHM81068.1 | SAMN05216499_114157 | SAMN05216499_114156 | Serine phosphatase RsbU, regulator of sigma subunit. | Uncharacterized membrane protein. | 0.470 |