STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM81304.1Major Facilitator Superfamily protein. (473 aa)    
Predicted Functional Partners:
SHN11967.1
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
  
     0.773
SHL04319.1
Predicted arabinose efflux permease, MFS family.
  
     0.710
SHM81394.1
HAD-superfamily phosphatase, subfamily IIIC/FkbH-like domain-containing protein.
    
  0.710
SHM81332.1
Cholesterol oxidase.
       0.706
SHM81362.1
Thioester reductase domain-containing protein.
       0.695
SHM33503.1
Predicted arabinose efflux permease, MFS family.
  
     0.587
SHK91490.1
Major Facilitator Superfamily protein.
  
     0.441
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.