STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM77873.1N-acetylglucosamine transport system substrate-binding protein. (473 aa)    
Predicted Functional Partners:
SHM77804.1
N-acetylglucosamine transport system permease protein.
 
 0.998
SHM77838.1
N-acetylglucosamine transport system permease protein.
 
 0.998
SHM32398.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.879
SHN14482.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
  
 0.879
SHM86531.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
 0.848
SHM20084.1
Xylobiose ABC transporter membrane protein.
  
 0.834
SHM20130.1
Xylobiose ABC transporter membrane protein.
  
  0.831
SHM77766.1
ROK family protein (putative glucokinase).
     
 0.762
SHK94577.1
Cellobiose transport system permease protein.
  
  0.755
SHM10507.1
Alpha-1,2-mannosidase, putative.
     
 0.733
Your Current Organism:
Streptomyces paucisporeus
NCBI taxonomy Id: 310782
Other names: CGMCC 4.2025, JCM 13276, NBRC 102072, S. paucisporeus, Streptomyces paucisporeus Xu et al. 2006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.