Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHK72310.1 | SHM78879.1 | SAMN05216499_101472 | SAMN05216499_11491 | Succinyldiaminopimelate desuccinylase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.828 |
SHK72310.1 | arcA | SAMN05216499_101472 | SAMN05216499_11492 | Succinyldiaminopimelate desuccinylase. | Arginine deiminase. | 0.813 |
SHK72310.1 | argG | SAMN05216499_101472 | SAMN05216499_111150 | Succinyldiaminopimelate desuccinylase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.774 |
SHK72310.1 | argG-2 | SAMN05216499_101472 | SAMN05216499_117126 | Succinyldiaminopimelate desuccinylase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.774 |
SHK95583.1 | SHL10477.1 | SAMN05216499_102172 | SAMN05216499_102554 | Agmatinase; Belongs to the arginase family. | N-Dimethylarginine dimethylaminohydrolase. | 0.602 |
SHK95583.1 | SHM78879.1 | SAMN05216499_102172 | SAMN05216499_11491 | Agmatinase; Belongs to the arginase family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.634 |
SHK95583.1 | arcA | SAMN05216499_102172 | SAMN05216499_11492 | Agmatinase; Belongs to the arginase family. | Arginine deiminase. | 0.732 |
SHK95583.1 | argG | SAMN05216499_102172 | SAMN05216499_111150 | Agmatinase; Belongs to the arginase family. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.527 |
SHK95583.1 | argG-2 | SAMN05216499_102172 | SAMN05216499_117126 | Agmatinase; Belongs to the arginase family. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.527 |
SHK95583.1 | argH | SAMN05216499_102172 | SAMN05216499_111151 | Agmatinase; Belongs to the arginase family. | Argininosuccinate lyase. | 0.803 |
SHL10477.1 | SHK95583.1 | SAMN05216499_102554 | SAMN05216499_102172 | N-Dimethylarginine dimethylaminohydrolase. | Agmatinase; Belongs to the arginase family. | 0.602 |
SHL10477.1 | SHL87563.1 | SAMN05216499_102554 | SAMN05216499_106314 | N-Dimethylarginine dimethylaminohydrolase. | Hypothetical protein. | 0.412 |
SHL10477.1 | SHM78879.1 | SAMN05216499_102554 | SAMN05216499_11491 | N-Dimethylarginine dimethylaminohydrolase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.559 |
SHL10477.1 | arcA | SAMN05216499_102554 | SAMN05216499_11492 | N-Dimethylarginine dimethylaminohydrolase. | Arginine deiminase. | 0.641 |
SHL10477.1 | argG | SAMN05216499_102554 | SAMN05216499_111150 | N-Dimethylarginine dimethylaminohydrolase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.439 |
SHL10477.1 | argG-2 | SAMN05216499_102554 | SAMN05216499_117126 | N-Dimethylarginine dimethylaminohydrolase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.439 |
SHL87563.1 | SHL10477.1 | SAMN05216499_106314 | SAMN05216499_102554 | Hypothetical protein. | N-Dimethylarginine dimethylaminohydrolase. | 0.412 |
SHL87563.1 | arcA | SAMN05216499_106314 | SAMN05216499_11492 | Hypothetical protein. | Arginine deiminase. | 0.684 |
SHM78879.1 | SHK72310.1 | SAMN05216499_11491 | SAMN05216499_101472 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Succinyldiaminopimelate desuccinylase. | 0.828 |
SHM78879.1 | SHK95583.1 | SAMN05216499_11491 | SAMN05216499_102172 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Agmatinase; Belongs to the arginase family. | 0.634 |
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