Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHM06898.1 | SHM61293.1 | SAMN05216499_10842 | SAMN05216499_112175 | Lantibiotic dehydratase, C terminus. | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | 0.772 |
SHM06898.1 | SHM61376.1 | SAMN05216499_10842 | SAMN05216499_112177 | Lantibiotic dehydratase, C terminus. | SagB-type dehydrogenase domain-containing protein. | 0.718 |
SHM06898.1 | SHM61449.1 | SAMN05216499_10842 | SAMN05216499_112179 | Lantibiotic dehydratase, C terminus. | Bacteriocin biosynthesis cyclodehydratase domain-containing protein. | 0.615 |
SHM06898.1 | SHM86688.1 | SAMN05216499_10842 | SAMN05216499_115127 | Lantibiotic dehydratase, C terminus. | Hypothetical protein. | 0.700 |
SHM06898.1 | SHM86765.1 | SAMN05216499_10842 | SAMN05216499_115130 | Lantibiotic dehydratase, C terminus. | Carbohydrate ABC transporter substrate-binding protein, CUT1 family. | 0.526 |
SHM06898.1 | SHN30151.1 | SAMN05216499_10842 | SAMN05216499_13453 | Lantibiotic dehydratase, C terminus. | Ricin-type beta-trefoil lectin domain-like. | 0.595 |
SHM61293.1 | SHM06898.1 | SAMN05216499_112175 | SAMN05216499_10842 | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | Lantibiotic dehydratase, C terminus. | 0.772 |
SHM61293.1 | SHM61327.1 | SAMN05216499_112175 | SAMN05216499_112176 | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | Lantibiotic dehydratase, C terminus. | 0.963 |
SHM61293.1 | SHM61376.1 | SAMN05216499_112175 | SAMN05216499_112177 | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | SagB-type dehydrogenase domain-containing protein. | 0.966 |
SHM61293.1 | SHM61449.1 | SAMN05216499_112175 | SAMN05216499_112179 | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | Bacteriocin biosynthesis cyclodehydratase domain-containing protein. | 0.947 |
SHM61293.1 | SHM86688.1 | SAMN05216499_112175 | SAMN05216499_115127 | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | Hypothetical protein. | 0.627 |
SHM61293.1 | SHN02437.1 | SAMN05216499_112175 | SAMN05216499_118110 | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | Hypothetical protein. | 0.513 |
SHM61327.1 | SHM61293.1 | SAMN05216499_112176 | SAMN05216499_112175 | Lantibiotic dehydratase, C terminus. | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | 0.963 |
SHM61327.1 | SHM61376.1 | SAMN05216499_112176 | SAMN05216499_112177 | Lantibiotic dehydratase, C terminus. | SagB-type dehydrogenase domain-containing protein. | 0.933 |
SHM61327.1 | SHM61449.1 | SAMN05216499_112176 | SAMN05216499_112179 | Lantibiotic dehydratase, C terminus. | Bacteriocin biosynthesis cyclodehydratase domain-containing protein. | 0.896 |
SHM61327.1 | SHM86688.1 | SAMN05216499_112176 | SAMN05216499_115127 | Lantibiotic dehydratase, C terminus. | Hypothetical protein. | 0.606 |
SHM61327.1 | SHN02437.1 | SAMN05216499_112176 | SAMN05216499_118110 | Lantibiotic dehydratase, C terminus. | Hypothetical protein. | 0.560 |
SHM61376.1 | SHM06898.1 | SAMN05216499_112177 | SAMN05216499_10842 | SagB-type dehydrogenase domain-containing protein. | Lantibiotic dehydratase, C terminus. | 0.718 |
SHM61376.1 | SHM61293.1 | SAMN05216499_112177 | SAMN05216499_112175 | SagB-type dehydrogenase domain-containing protein. | Thiopeptide-type bacteriocin biosynthesis domain-containing protein. | 0.966 |
SHM61376.1 | SHM61327.1 | SAMN05216499_112177 | SAMN05216499_112176 | SagB-type dehydrogenase domain-containing protein. | Lantibiotic dehydratase, C terminus. | 0.933 |
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